Registry
All experiments
Every tile is an independent, self-contained experiment page loaded into this shell as its own microfrontend. Register a new one — hosted anywhere — from the Manage panel and it appears in the menu without touching any existing page.
Start Here — Interactive Pipeline Walkthrough
Open this one first. An interactive, click-through (or auto-play) flowchart of the entire ConnectionMiner pipeline — every input, every matrix it builds, what the solver does, every output. C, Ĉ, and β are live Plotly charts (hover any cell/dot for real type or gene names); every node explains what's on the x-axis, the y-axis, and what the pattern is actually telling you.
Open experiment →Recovery BatteryUMAP + Confusion Matrix — per Family
Same 4 recovery-battery conditions as the confusion-matrix experiment, but each confusion matrix is paired with a t-SNE/UMAP scatter of the underlying cells (green = predicted matches true type, red = mismatch). Hover any point for its predicted vs. true type.
Open experiment →Recovery BatteryRecovery Battery — How It Works
The flowchart for the *other* experiment in this hub — not the regular solver run, but the hide-30%-and-recover stress test. Walks through the 70/30 split, the two solver passes (connectivity-only vs. NC-gated expression), the shuffle-null scoring, and the YES/no/ANTI verdict — with real numbers (e.g. TmY: 10.7% → 94.6% recovery) at every step.
Open experiment →Full Solver RunUMAP + Matrix Heatmaps — Full Solver Run
The regular (non-recovery-battery) end-to-end solver run: a UMAP/t-SNE of all 109,743 cells colored by inferred functional subsystem, paired with a tab-switcher for every matrix the solver produces or consumes — C, Ĉ, P (solved), P Constraints, β, G, Gene Correlation (ref), and the loss trajectory — all live, hoverable Plotly charts, each with an axis + interpretation readout. Hovering a UMAP point cross-highlights its type's row/column live on the C and Ĉ tabs.
Open experiment →Recovery BatteryFamily Battery — All Complete-Picture Views
Every family's full 5-condition recovery battery in one self-contained document: Lamina, Lawf, Lamina+Lawf, Dm, Mi, Tm, TmY, T4, T5, C, LC and LPLC. Each view carries its own condition switcher, so the page runs standalone with no dependency on the hub.
Open experiment →Full Solver RunMotor ↔ Visual — Linked Dashboard
Cross-subsystem linked view tying motor-side types to visual-system types: selecting on one panel highlights the corresponding rows/columns on the other, so shared connectivity motifs between the two subsystems are directly comparable.
Open experiment →MatricesC Matrix — Full vs. Visual Split Heatmap
The complete connectivity matrix C rendered as a split heatmap: full network on one side, visual-system-only submatrix on the other, at matched color scaling so density differences between the whole brain and the visual subsystem are readable at a glance.
Open experiment →