ConnectionMiner · Drosophila connectomics
Click the brain. Open the experiment.
139,255 neurons, 50M+ synapses, and a solver that infers cell type from wiring alone. Every glowing probe on the map below is an independent, self-contained dashboard — UMAP embeddings, confusion matrices, recovery batteries and full solver runs.
Drosophila connectome · hover to excite the network · click a probe to open its experiment
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Start Here — Interactive Pipeline Walkthrough
Open this one first. An interactive, click-through (or auto-play) flowchart of the entire ConnectionMiner pipeline — every input, every matrix it builds, what the solver does, every output. C, Ĉ, and β are live Plotly charts (hover any cell/dot for real type or gene names); every node explains what's on the x-axis, the y-axis, and what the pattern is actually telling you.
MorphologyMorphology — Motor
3D viewer of the motor connectome's skeletons: 707 of the 730 C-matrix types have a local skeleton (the rest are absent from the cm730 bundle), 127,839 nodes after twig pruning and contraction. Orbit, zoom and pan; colour by population, side, depth or neuron; filter by side. Depth fog fades far branches toward the background and an optional slow spin adds parallax, so near and far arbors read apart.
MorphologyMorphology — Visual
3D viewer of FlyWire visual-system skeletons: a stratified sample of one neuron per type per side across all 741 types (1,399 skeletons, 326,698 nodes), drawn from 95,079 reconstructions. Sampling is by side so both optic lobes appear. Colour by subsystem, side, depth or neuron; depth fog and an optional slow spin make the 3D structure readable.